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Documentation API Reference Changelog

v1.0.0

API Reference

v1.0.0Documentation API Reference Changelog

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AUTH

Authentication
- Generate authentication tokenpost

CONSTRUE

/construe/extract
- Extract medical codes from textpost
/construe/upload
- Upload custom code systempost

LANG2FHIR

/lang2fhir/create
- Create FHIR resource from textpost
/lang2fhir/document
- Convert document to FHIR resourcepost
/lang2fhir/profile/upload
- Upload custom FHIR profilepost
/lang2fhir/search
- Generate FHIR search parameters from textpost

COHORT

/cohort
- Analyze text for patient cohort criteriapost

FHIR2SUMMARY

Summary Templates
Summary Generation
- Generate a summary from FHIR resourcespost

TOOLS

/tools/cohort
- Analyze patient cohortspost
/tools/lang2fhir-and-create
- Create and store FHIR resourcepost
/tools/lang2fhir-and-search
- Search FHIR resourcespost
/tools/mcp-server/create
- Create MCP serverpost
/tools/mcp-server/list
- List MCP servers for a specific userget
/tools/mcp-server/{mcp_server_id}
- Get MCP server by IDget
- Delete MCP server by IDdel
/tools/mcp-server/{mcp_server_id}/list
- List MCP server toolsget
/tools/mcp-server/tool/{mcp_server_tool_id}
- Get MCP server tool by IDget
- Delete MCP server tool by IDdel
/tools/mcp-server/tool/{mcp_server_tool_id}/call
- Call MCP server toolpost

AGENT

/agent/chat
- Chat with agentpost
/agent/chat/messages
- Get chat messagesget
/agent/create
- Create a new agentpost
/agent/{id}
/agent/list
- List user's agentsget
/agent/prompts
- Create agent promptpost
/agent/prompts/{id}
/agent/prompts/list
- List agent promptsget
/agent/prompts/load-defaults
- Load default promptspost

WORKFLOWS

/workflows
- List all workflowsget
- Create new workflowpost
/workflows/{id}
/workflows/{id}/execute
- Execute workflowpost

PhenoML FHIR Provider API

/fhir-provider
- Create FHIR providerpost
/fhir-provider/{fhir_provider_id}
- Get FHIR provider by IDget
- Delete FHIR providerdel
/fhir-provider/{fhir_provider_id}/add-auth-config
- Add authentication configuration to existing FHIR providerpatch
/fhir-provider/{fhir_provider_id}/remove-auth-config
- Remove authentication configurationpatch
/fhir-provider/{fhir_provider_id}/set-active-auth-config
- Set active authentication configurationpatch
/fhir-provider/list
- List FHIR providersget

FHIR PROXY

FHIR Operations

Create MCP server

post

https://{instanceUrl}/tools/mcp-server/create

Creates a new MCP server

Language

Credentials

Bearer

JWT

URL

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